during the change from version 0.9 to 1.1, wells are no longer configured properly. this was fixed with Porrima 1.1.1 and is available for download in the resources section. Please replace your outdated file.
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The only known bug of Porrima thus far is that in the Boundary Dialog, one may not switch to Neumann and back to Dirichlet again. We'll try to fix that in upcoming versions.